STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN07207.1X-X-X-Leu-X-X-Gly heptad repeat-containing protein. (843 aa)    
Predicted Functional Partners:
SEN07181.1
Hypothetical protein.
   
 0.978
SEN07163.1
Transcriptional regulator, TetR family.
 
  
 0.825
SEN07221.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
   0.455
SEM72548.1
ABC-2 type transport system permease protein.
  
 
  0.421
SEN07247.1
Uncharacterised ACR, YkgG family COG1556.
       0.412
SEN07256.1
Hypothetical protein.
       0.412
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.