STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN09011.1D-sedoheptulose 7-phosphate isomerase. (215 aa)    
Predicted Functional Partners:
SEN08991.1
Glucokinase.
      0.815
SEM61562.1
Flagellar motor switch protein FliN/FliY.
    
 
 0.612
SEM73412.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
  
  
 0.588
SEM98649.1
NH(3)-dependent NAD(+) synthetase.
    
 0.579
SEM81446.1
Hypothetical protein.
    
 
 0.547
dnaA
Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.547
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
   
 
 0.515
SEN18074.1
Glycosyltransferase sugar-binding region containing DXD motif-containing protein.
   
 
 0.505
SEM65275.1
Uroporphyrinogen III methyltransferase / synthase.
       0.493
SEN08970.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.492
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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