STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN15240.1Sugar phosphate isomerase/epimerase. (304 aa)    
Predicted Functional Partners:
SEN15267.1
Predicted dehydrogenase.
 
 
  0.960
SEN15185.1
Predicted dehydrogenase.
 
 
  0.908
SEN15206.1
Sugar phosphate isomerase/epimerase.
 
     0.893
SEN15330.1
Ribose transport system substrate-binding protein.
 
    0.802
SEN15289.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
    0.693
SEN15315.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
    0.692
SEN13341.1
Predicted dehydrogenase.
 
 
  0.549
SEN17903.1
Hypothetical protein.
 
 
  0.545
SEM81164.1
Predicted dehydrogenase.
 
 
  0.532
SEN09130.1
Protein of unknown function.
  
     0.528
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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