Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM94265.1 | SEN16371.1 | SAMN05216180_2119 | SAMN05216180_2943 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Hypothetical protein. | 0.521 |
SEN00653.1 | SEN16371.1 | SAMN05216180_2437 | SAMN05216180_2943 | Uncharacterized conserved protein. | Hypothetical protein. | 0.537 |
SEN16371.1 | SEM94265.1 | SAMN05216180_2943 | SAMN05216180_2119 | Hypothetical protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.521 |
SEN16371.1 | SEN00653.1 | SAMN05216180_2943 | SAMN05216180_2437 | Hypothetical protein. | Uncharacterized conserved protein. | 0.537 |
SEN16371.1 | guaA | SAMN05216180_2943 | SAMN05216180_1148 | Hypothetical protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.426 |
guaA | SEN16371.1 | SAMN05216180_1148 | SAMN05216180_2943 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Hypothetical protein. | 0.426 |