Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC53508.1 | SMC53519.1 | SAMN04488101_101165 | SAMN04488101_101166 | PhnB protein. | ATP-dependent RNA helicase RhlE. | 0.468 |
SMC53508.1 | SMC68256.1 | SAMN04488101_101165 | SAMN04488101_102141 | PhnB protein. | Glyoxylase, beta-lactamase superfamily II. | 0.502 |
SMC53508.1 | SMC95021.1 | SAMN04488101_101165 | SAMN04488101_106167 | PhnB protein. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.649 |
SMC53508.1 | SMC98320.1 | SAMN04488101_101165 | SAMN04488101_107162 | PhnB protein. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.808 |
SMC53508.1 | SMD03167.1 | SAMN04488101_101165 | SAMN04488101_10947 | PhnB protein. | Glyoxylase, beta-lactamase superfamily II. | 0.502 |
SMC53519.1 | SMC53508.1 | SAMN04488101_101166 | SAMN04488101_101165 | ATP-dependent RNA helicase RhlE. | PhnB protein. | 0.468 |
SMC68256.1 | SMC53508.1 | SAMN04488101_102141 | SAMN04488101_101165 | Glyoxylase, beta-lactamase superfamily II. | PhnB protein. | 0.502 |
SMC68256.1 | SMD03167.1 | SAMN04488101_102141 | SAMN04488101_10947 | Glyoxylase, beta-lactamase superfamily II. | Glyoxylase, beta-lactamase superfamily II. | 0.968 |
SMC95021.1 | SMC53508.1 | SAMN04488101_106167 | SAMN04488101_101165 | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | PhnB protein. | 0.649 |
SMC98320.1 | SMC53508.1 | SAMN04488101_107162 | SAMN04488101_101165 | Uncharacterized conserved protein YndB, AHSA1/START domain. | PhnB protein. | 0.808 |
SMD03167.1 | SMC53508.1 | SAMN04488101_10947 | SAMN04488101_101165 | Glyoxylase, beta-lactamase superfamily II. | PhnB protein. | 0.502 |
SMD03167.1 | SMC68256.1 | SAMN04488101_10947 | SAMN04488101_102141 | Glyoxylase, beta-lactamase superfamily II. | Glyoxylase, beta-lactamase superfamily II. | 0.968 |