Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC57512.1 | SMC57522.1 | SAMN04488101_101348 | SAMN04488101_101349 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.941 |
SMC57512.1 | SMC57533.1 | SAMN04488101_101348 | SAMN04488101_101350 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.922 |
SMC57512.1 | SMC57543.1 | SAMN04488101_101348 | SAMN04488101_101351 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.910 |
SMC57512.1 | SMC78640.1 | SAMN04488101_101348 | SAMN04488101_10322 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.774 |
SMC57512.1 | SMC78654.1 | SAMN04488101_101348 | SAMN04488101_10323 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.774 |
SMC57512.1 | SMC89721.1 | SAMN04488101_101348 | SAMN04488101_10520 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.774 |
SMC57512.1 | SMC89728.1 | SAMN04488101_101348 | SAMN04488101_10521 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.774 |
SMC57512.1 | SMD01924.1 | SAMN04488101_101348 | SAMN04488101_108229 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.774 |
SMC57512.1 | SMD01927.1 | SAMN04488101_101348 | SAMN04488101_108230 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.774 |
SMC57512.1 | SMD13464.1 | SAMN04488101_101348 | SAMN04488101_11694 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.774 |
SMC57522.1 | SMC57512.1 | SAMN04488101_101349 | SAMN04488101_101348 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.941 |
SMC57522.1 | SMC57533.1 | SAMN04488101_101349 | SAMN04488101_101350 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.926 |
SMC57522.1 | SMC57543.1 | SAMN04488101_101349 | SAMN04488101_101351 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.923 |
SMC57522.1 | SMC78654.1 | SAMN04488101_101349 | SAMN04488101_10323 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.774 |
SMC57522.1 | SMC89728.1 | SAMN04488101_101349 | SAMN04488101_10521 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.774 |
SMC57522.1 | SMD01924.1 | SAMN04488101_101349 | SAMN04488101_108229 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.774 |
SMC57522.1 | SMD13464.1 | SAMN04488101_101349 | SAMN04488101_11694 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.776 |
SMC57533.1 | SMC57512.1 | SAMN04488101_101350 | SAMN04488101_101348 | Protein of unknown function. | TonB-linked outer membrane protein, SusC/RagA family. | 0.922 |
SMC57533.1 | SMC57522.1 | SAMN04488101_101350 | SAMN04488101_101349 | Protein of unknown function. | Starch-binding associating with outer membrane. | 0.926 |
SMC57533.1 | SMC57543.1 | SAMN04488101_101350 | SAMN04488101_101351 | Protein of unknown function. | Protein of unknown function. | 0.932 |
page 1 of 5