Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC57771.1 | SMC57778.1 | SAMN04488101_101393 | SAMN04488101_101394 | Hypothetical protein. | FAD dependent oxidoreductase TIGR03364. | 0.945 |
SMC57771.1 | SMC57798.1 | SAMN04488101_101393 | SAMN04488101_101395 | Hypothetical protein. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.803 |
SMC57771.1 | SMC57806.1 | SAMN04488101_101393 | SAMN04488101_101396 | Hypothetical protein. | Phosphonoacetate hydrolase. | 0.789 |
SMC57771.1 | SMC57813.1 | SAMN04488101_101393 | SAMN04488101_101397 | Hypothetical protein. | Starch-binding associating with outer membrane. | 0.656 |
SMC57771.1 | SMC57816.1 | SAMN04488101_101393 | SAMN04488101_101398 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.708 |
SMC57771.1 | SMC57825.1 | SAMN04488101_101393 | SAMN04488101_101399 | Hypothetical protein. | Transcriptional regulator, XRE family with cupin sensor. | 0.742 |
SMC57771.1 | SMC57832.1 | SAMN04488101_101393 | SAMN04488101_101400 | Hypothetical protein. | Phosphoglycerate mutase. | 0.509 |
SMC57771.1 | SMC57850.1 | SAMN04488101_101393 | SAMN04488101_101402 | Hypothetical protein. | Calcineurin-like phosphoesterase superfamily domain-containing protein. | 0.415 |
SMC57778.1 | SMC57771.1 | SAMN04488101_101394 | SAMN04488101_101393 | FAD dependent oxidoreductase TIGR03364. | Hypothetical protein. | 0.945 |
SMC57778.1 | SMC57798.1 | SAMN04488101_101394 | SAMN04488101_101395 | FAD dependent oxidoreductase TIGR03364. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.794 |
SMC57778.1 | SMC57806.1 | SAMN04488101_101394 | SAMN04488101_101396 | FAD dependent oxidoreductase TIGR03364. | Phosphonoacetate hydrolase. | 0.763 |
SMC57778.1 | SMC57813.1 | SAMN04488101_101394 | SAMN04488101_101397 | FAD dependent oxidoreductase TIGR03364. | Starch-binding associating with outer membrane. | 0.654 |
SMC57778.1 | SMC57816.1 | SAMN04488101_101394 | SAMN04488101_101398 | FAD dependent oxidoreductase TIGR03364. | TonB-linked outer membrane protein, SusC/RagA family. | 0.646 |
SMC57778.1 | SMC57825.1 | SAMN04488101_101394 | SAMN04488101_101399 | FAD dependent oxidoreductase TIGR03364. | Transcriptional regulator, XRE family with cupin sensor. | 0.773 |
SMC57778.1 | SMC57832.1 | SAMN04488101_101394 | SAMN04488101_101400 | FAD dependent oxidoreductase TIGR03364. | Phosphoglycerate mutase. | 0.481 |
SMC57798.1 | SMC57771.1 | SAMN04488101_101395 | SAMN04488101_101393 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.803 |
SMC57798.1 | SMC57778.1 | SAMN04488101_101395 | SAMN04488101_101394 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | FAD dependent oxidoreductase TIGR03364. | 0.794 |
SMC57798.1 | SMC57806.1 | SAMN04488101_101395 | SAMN04488101_101396 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Phosphonoacetate hydrolase. | 0.948 |
SMC57798.1 | SMC57813.1 | SAMN04488101_101395 | SAMN04488101_101397 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Starch-binding associating with outer membrane. | 0.444 |
SMC57798.1 | SMC57816.1 | SAMN04488101_101395 | SAMN04488101_101398 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | TonB-linked outer membrane protein, SusC/RagA family. | 0.446 |
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