Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC51597.1 | SMC74499.1 | SAMN04488101_10133 | SAMN04488101_102663 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.998 |
SMC51597.1 | SMC75681.1 | SAMN04488101_10133 | SAMN04488101_102745 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.461 |
SMC51597.1 | SMC80366.1 | SAMN04488101_10133 | SAMN04488101_103144 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Aspartate kinase. | 0.416 |
SMC51597.1 | mdh | SAMN04488101_10133 | SAMN04488101_11157 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.463 |
SMC51597.1 | nadA | SAMN04488101_10133 | SAMN04488101_102662 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.999 |
SMC51597.1 | panD | SAMN04488101_10133 | SAMN04488101_102522 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.502 |
SMC51597.1 | purA | SAMN04488101_10133 | SAMN04488101_10137 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.529 |
SMC51597.1 | pyrB | SAMN04488101_10133 | SAMN04488101_10112 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.565 |
SMC68264.1 | SMC74499.1 | SAMN04488101_102142 | SAMN04488101_102663 | L-asparaginase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.921 |
SMC68264.1 | SMC75681.1 | SAMN04488101_102142 | SAMN04488101_102745 | L-asparaginase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.916 |
SMC68264.1 | SMC80366.1 | SAMN04488101_102142 | SAMN04488101_103144 | L-asparaginase. | Aspartate kinase. | 0.906 |
SMC68264.1 | panD | SAMN04488101_102142 | SAMN04488101_102522 | L-asparaginase. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.899 |
SMC68264.1 | pyrB | SAMN04488101_102142 | SAMN04488101_10112 | L-asparaginase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.907 |
SMC74499.1 | SMC51597.1 | SAMN04488101_102663 | SAMN04488101_10133 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.998 |
SMC74499.1 | SMC68264.1 | SAMN04488101_102663 | SAMN04488101_102142 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | L-asparaginase. | 0.921 |
SMC74499.1 | SMC75681.1 | SAMN04488101_102663 | SAMN04488101_102745 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.920 |
SMC74499.1 | SMC80366.1 | SAMN04488101_102663 | SAMN04488101_103144 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Aspartate kinase. | 0.908 |
SMC74499.1 | SMC95367.1 | SAMN04488101_102663 | SAMN04488101_106217 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Carbon-nitrogen hydrolase. | 0.913 |
SMC74499.1 | mdh | SAMN04488101_102663 | SAMN04488101_11157 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.907 |
SMC74499.1 | nadA | SAMN04488101_102663 | SAMN04488101_102662 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.999 |
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