Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC80414.1 | SMC80436.1 | SAMN04488101_103149 | SAMN04488101_103152 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hypothetical protein; Belongs to the BI1 family. | 0.442 |
SMC80414.1 | SMD13576.1 | SAMN04488101_103149 | SAMN04488101_116118 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peptide-methionine (R)-S-oxide reductase. | 0.520 |
SMC80418.1 | SMC80436.1 | SAMN04488101_103151 | SAMN04488101_103152 | Hypothetical protein. | Hypothetical protein; Belongs to the BI1 family. | 0.449 |
SMC80436.1 | SMC80414.1 | SAMN04488101_103152 | SAMN04488101_103149 | Hypothetical protein; Belongs to the BI1 family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.442 |
SMC80436.1 | SMC80418.1 | SAMN04488101_103152 | SAMN04488101_103151 | Hypothetical protein; Belongs to the BI1 family. | Hypothetical protein. | 0.449 |
SMC80436.1 | SMC80445.1 | SAMN04488101_103152 | SAMN04488101_103153 | Hypothetical protein; Belongs to the BI1 family. | Hypothetical protein. | 0.661 |
SMC80436.1 | SMC80459.1 | SAMN04488101_103152 | SAMN04488101_103155 | Hypothetical protein; Belongs to the BI1 family. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.521 |
SMC80436.1 | SMC87149.1 | SAMN04488101_103152 | SAMN04488101_104100 | Hypothetical protein; Belongs to the BI1 family. | Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain. | 0.426 |
SMC80436.1 | SMD13576.1 | SAMN04488101_103152 | SAMN04488101_116118 | Hypothetical protein; Belongs to the BI1 family. | Peptide-methionine (R)-S-oxide reductase. | 0.668 |
SMC80436.1 | murQ | SAMN04488101_103152 | SAMN04488101_103154 | Hypothetical protein; Belongs to the BI1 family. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.706 |
SMC80445.1 | SMC80436.1 | SAMN04488101_103153 | SAMN04488101_103152 | Hypothetical protein. | Hypothetical protein; Belongs to the BI1 family. | 0.661 |
SMC80445.1 | SMC80459.1 | SAMN04488101_103153 | SAMN04488101_103155 | Hypothetical protein. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.647 |
SMC80445.1 | murQ | SAMN04488101_103153 | SAMN04488101_103154 | Hypothetical protein. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.802 |
SMC80459.1 | SMC80436.1 | SAMN04488101_103155 | SAMN04488101_103152 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | Hypothetical protein; Belongs to the BI1 family. | 0.521 |
SMC80459.1 | SMC80445.1 | SAMN04488101_103155 | SAMN04488101_103153 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | Hypothetical protein. | 0.647 |
SMC80459.1 | murQ | SAMN04488101_103155 | SAMN04488101_103154 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.660 |
SMC87149.1 | SMC80436.1 | SAMN04488101_104100 | SAMN04488101_103152 | Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain. | Hypothetical protein; Belongs to the BI1 family. | 0.426 |
SMD13576.1 | SMC80414.1 | SAMN04488101_116118 | SAMN04488101_103149 | Peptide-methionine (R)-S-oxide reductase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.520 |
SMD13576.1 | SMC80436.1 | SAMN04488101_116118 | SAMN04488101_103152 | Peptide-methionine (R)-S-oxide reductase. | Hypothetical protein; Belongs to the BI1 family. | 0.668 |
murQ | SMC80436.1 | SAMN04488101_103154 | SAMN04488101_103152 | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | Hypothetical protein; Belongs to the BI1 family. | 0.706 |
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