STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC79119.1GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase. (358 aa)    
Predicted Functional Partners:
SMC78881.1
UDP-N-acetylglucosamine 4-epimerase.
 
 
  0.892
SMC79159.1
Asparagine synthase (glutamine-hydrolysing).
 
  
 0.882
SMC79213.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.878
SMC79205.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.872
SMC79181.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.841
SMC79041.1
Asparagine synthase (glutamine-hydrolysing).
 
  
 0.839
SMC78953.1
UDP-glucose 4-epimerase.
 
 
  0.821
SMC79109.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.821
SMC79171.1
Hexapeptide repeat of succinyl-transferase.
  
  
 0.793
SMC68033.1
1,4-alpha-glucan branching enzyme.
   
 0.782
Your Current Organism:
Pedobacter nyackensis
NCBI taxonomy Id: 475255
Other names: DSM 19625, LMG 24260, LMG:24260, P. nyackensis, Pedobacter nyackensis Gordon et al. 2009, strain NWG-II14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.