Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC70601.1 | SMC87422.1 | SAMN04488101_102331 | SAMN04488101_104215 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.774 |
SMC87269.1 | SMC87422.1 | SAMN04488101_104162 | SAMN04488101_104215 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.774 |
SMC87337.1 | SMC87354.1 | SAMN04488101_104201 | SAMN04488101_104206 | Starch-binding associating with outer membrane. | SusD family protein. | 0.461 |
SMC87337.1 | SMC87422.1 | SAMN04488101_104201 | SAMN04488101_104215 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.799 |
SMC87354.1 | SMC87337.1 | SAMN04488101_104206 | SAMN04488101_104201 | SusD family protein. | Starch-binding associating with outer membrane. | 0.461 |
SMC87354.1 | SMC87422.1 | SAMN04488101_104206 | SAMN04488101_104215 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.827 |
SMC87354.1 | SMC87425.1 | SAMN04488101_104206 | SAMN04488101_104216 | SusD family protein. | SusD family protein. | 0.439 |
SMC87354.1 | SMC87436.1 | SAMN04488101_104206 | SAMN04488101_104218 | SusD family protein. | SusD family protein. | 0.415 |
SMC87422.1 | SMC70601.1 | SAMN04488101_104215 | SAMN04488101_102331 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.774 |
SMC87422.1 | SMC87269.1 | SAMN04488101_104215 | SAMN04488101_104162 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.774 |
SMC87422.1 | SMC87337.1 | SAMN04488101_104215 | SAMN04488101_104201 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.799 |
SMC87422.1 | SMC87354.1 | SAMN04488101_104215 | SAMN04488101_104206 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.827 |
SMC87422.1 | SMC87425.1 | SAMN04488101_104215 | SAMN04488101_104216 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.936 |
SMC87422.1 | SMC87436.1 | SAMN04488101_104215 | SAMN04488101_104218 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.892 |
SMC87422.1 | SMC88100.1 | SAMN04488101_104215 | SAMN04488101_104231 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.774 |
SMC87422.1 | SMC94797.1 | SAMN04488101_104215 | SAMN04488101_106143 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.774 |
SMC87422.1 | SMD07401.1 | SAMN04488101_104215 | SAMN04488101_111127 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.774 |
SMC87422.1 | SMD10400.1 | SAMN04488101_104215 | SAMN04488101_11393 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.776 |
SMC87425.1 | SMC87354.1 | SAMN04488101_104216 | SAMN04488101_104206 | SusD family protein. | SusD family protein. | 0.439 |
SMC87425.1 | SMC87422.1 | SAMN04488101_104216 | SAMN04488101_104215 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.936 |
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