SMC90052.1 protein (Pedobacter nyackensis) - STRING interaction network

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Score

SMC90052.1

RNA polymerase sigma-70 factor, ECF subfamily. (206 aa)

Predicted Functional Partners:

SMC62246.1

0.709

SMD12421.1

0.679

SMC69651.1

0.604

SMC90058.1

0.599

SMC90047.1

0.517

SMC89646.1

0.513

SMC91869.1

0.488

rpoC

0.444

rpoB

0.436

SMC57950.1

0.410

Your Current Organism:

Pedobacter nyackensis

NCBI taxonomy Id: 475255
Other names: DSM 19625, LMG 24260, LMG:24260, P. nyackensis, Pedobacter nyackensis Gordon et al. 2009, strain NWG-II14

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMC57950.1	SMC62246.1	SAMN04488101_101422	SAMN04488101_101782	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.530
SMC57950.1	SMC90052.1	SAMN04488101_101422	SAMN04488101_10562	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.410
SMC57950.1	SMD12421.1	SAMN04488101_101422	SAMN04488101_11535	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.402
SMC57950.1	rpoB	SAMN04488101_101422	SAMN04488101_11141	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.436
SMC57950.1	rpoC	SAMN04488101_101422	SAMN04488101_11142	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.444
SMC62246.1	SMC57950.1	SAMN04488101_101782	SAMN04488101_101422	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.530
SMC62246.1	SMC69651.1	SAMN04488101_101782	SAMN04488101_102232	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.561
SMC62246.1	SMC90052.1	SAMN04488101_101782	SAMN04488101_10562	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.709
SMC62246.1	rpoB	SAMN04488101_101782	SAMN04488101_11141	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.436
SMC62246.1	rpoC	SAMN04488101_101782	SAMN04488101_11142	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.444
SMC69651.1	SMC62246.1	SAMN04488101_102232	SAMN04488101_101782	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.561
SMC69651.1	SMC90052.1	SAMN04488101_102232	SAMN04488101_10562	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.604
SMC69651.1	rpoB	SAMN04488101_102232	SAMN04488101_11141	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.436
SMC69651.1	rpoC	SAMN04488101_102232	SAMN04488101_11142	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.444
SMC89646.1	SMC90052.1	SAMN04488101_10511	SAMN04488101_10562	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.513
SMC89646.1	SMD12421.1	SAMN04488101_10511	SAMN04488101_11535	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.575
SMC89646.1	rpoB	SAMN04488101_10511	SAMN04488101_11141	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.436
SMC89646.1	rpoC	SAMN04488101_10511	SAMN04488101_11142	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.444
SMC90047.1	SMC90052.1	SAMN04488101_10561	SAMN04488101_10562	Outer membrane receptor proteins, mostly Fe transport.	RNA polymerase sigma-70 factor, ECF subfamily.	0.517
SMC90052.1	SMC57950.1	SAMN04488101_10562	SAMN04488101_101422	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.410