STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD13206.1Beta-glucosidase. (803 aa)    
Predicted Functional Partners:
SMC98800.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.926
SMD08961.1
Alpha-glucosidase.
 
  
 0.891
SMC82371.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.872
SMC66537.1
Beta-glucosidase.
    
 0.850
SMC75027.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
     
 0.838
SMD03896.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.738
SMD11349.1
Beta-glucosidase.
  
  
 
0.711
SMC91979.1
Alpha-glucosidase.
 
  
 0.684
SMC87317.1
Alpha-glucosidase.
 
  
 0.675
SMD16148.1
Beta-fructofuranosidase.
   
 
  0.628
Your Current Organism:
Pedobacter nyackensis
NCBI taxonomy Id: 475255
Other names: DSM 19625, LMG 24260, LMG:24260, P. nyackensis, Pedobacter nyackensis Gordon et al. 2009, strain NWG-II14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.