STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD17209.1Disulphide bond corrector protein DsbC. (149 aa)    
Predicted Functional Partners:
SMD13576.1
Peptide-methionine (R)-S-oxide reductase.
   
 
 0.989
SMD13991.1
Thioredoxin-like domain-containing protein.
     0.972
SMD18447.1
Cytochrome C biogenesis protein transmembrane region.
     0.944
SMD17348.1
Cytochrome C biogenesis protein transmembrane region.
     0.942
SMD17211.1
Thiol-disulfide isomerase or thioredoxin.
  
   0.849
SMD17215.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.815
SMD17213.1
SusD family protein.
 
     0.795
SMD17206.1
Thiol-disulfide isomerase or thioredoxin.
       0.762
SMC99028.1
Cell division protein FtsQ.
  
     0.644
SMC53720.1
Type I restriction enzyme R protein N terminus (HSDR_N).
  
     0.629
Your Current Organism:
Pedobacter nyackensis
NCBI taxonomy Id: 475255
Other names: DSM 19625, LMG 24260, LMG:24260, P. nyackensis, Pedobacter nyackensis Gordon et al. 2009, strain NWG-II14
Server load: low (16%) [HD]