Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APC90742.1DNA polymerase III beta subunit. (367 aa)    
Predicted Functional Partners:
APC90869.1
DNA polymerase III subunits gamma and tau.
 
 
 0.999
APC90887.1
DNA polymerase III delta subunit.
    
 0.999
APC91976.1
DNA polymerase III delta prime subunit.
  
 0.999
APC91479.1
DNA polymerase III epsilon subunit.
 
 
 0.998
APC92029.1
DNA polymerase III alpha subunit.
  
 
 0.998
APC90934.1
DNA polymerase III (CHI subunit) protein.
    
 0.994
APC90741.1
Chromosomal replication initiator protein DnaA.
 
 0.992
APC92295.1
DNA polymerase I.
 
 0.992
APC91461.1
DNA polymerase IV.
   
 0.957
APC91952.1
DNA mismatch repair protein MutL.
   
 0.942
Your Current Organism:
Francisella sp. MA067296
NCBI taxonomy Id: 475375
Other names: F. sp. MA067296
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