Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
APC90750.1Aspartate carbamoyltransferase. (306 aa)    
Predicted Functional Partners:
APC90751.1
Carbamoyl-phosphate synthase large chain.
 
 0.999
APC90752.1
Carbamoyl-phosphate synthase small chain.
 
 0.999
APC90754.1
Dihydroorotase.
 0.999
APC90758.1
Orotidine 5'-phosphate decarboxylase.
  
  
 0.951
APC90759.1
Dihydroorotate dehydrogenase.
  
  
 0.951
APC91999.1
Orotate phosphoribosyltransferase.
  
  
 0.951
APC90891.1
Adenylosuccinate synthetase.
  
 
 0.947
APC92110.1
Aspartate aminotransferase.
 
  
  0.931
APC91099.1
Asparagine synthetase [glutamine-hydrolyzing].
  
 
 0.910
APC91705.1
Asparagine synthetase [glutamine-hydrolyzing].
  
 
 0.910
Your Current Organism:
Francisella sp. MA067296
NCBI taxonomy Id: 475375
Other names: F. sp. MA067296
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