Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
APC90814.1tRNA-specific 2-thiouridylase MnmA. (359 aa)    
Predicted Functional Partners:
APC91979.1
tRNA 2-thiouridine synthesizing protein E.
   
 0.985
APC91689.1
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
     
  0.900
APC91306.1
Cysteine desulfurase.
  
 
 0.881
APC90813.1
Translation elongation factor LepA.
 
    0.789
APC92079.1
Riboflavin kinase / FMN adenylyltransferase.
 
  
 0.755
APC91225.1
GTPase and tRNA-U34 5-formylation enzyme TrmE.
 
 0.716
APC91375.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA.
 
 0.690
APC91154.1
Sulfur acceptor protein SufE for iron-sulfur cluster assembly.
     
 0.638
APC91301.1
tRNA(Ile)-lysidine synthetase.
 
 
 
 0.544
APC90812.1
SSU ribosomal protein S20p.
  
  
 0.498
Your Current Organism:
Francisella sp. MA067296
NCBI taxonomy Id: 475375
Other names: F. sp. MA067296
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