Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APC90838.1RNase R-related protein. (618 aa)    
Predicted Functional Partners:
APC91692.1
Ribonuclease D.
   
 0.827
APC92141.1
Ribonuclease PH.
   
 0.825
APC90966.1
SSU ribosomal protein S17p (S11e).
 
 
 0.692
APC91496.1
SSU ribosomal protein S18p, zinc-independent.
  
   0.666
APC90954.1
SSU ribosomal protein S7p (S5e).
    
 
 0.663
APC90980.1
SSU ribosomal protein S11p (S14e).
   
   0.652
APC91236.1
Protoporphyrinogen IX oxidase, aerobic, HemY.
 
     0.636
APC90979.1
SSU ribosomal protein S13p (S18e).
    
 
 0.629
APC90953.1
SSU ribosomal protein S12p (S23e).
    
 
 0.627
APC91254.1
SSU ribosomal protein S15p (S13e).
   
 
 0.627
Your Current Organism:
Francisella sp. MA067296
NCBI taxonomy Id: 475375
Other names: F. sp. MA067296
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