Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APC90970.1SSU ribosomal protein S14p (S29e), zinc-independent. (101 aa)    
Predicted Functional Partners:
APC90953.1
SSU ribosomal protein S12p (S23e).
  
 0.999
APC90954.1
SSU ribosomal protein S7p (S5e).
 
 0.999
APC90956.1
SSU ribosomal protein S10p (S20e).
  
 0.999
APC90958.1
LSU ribosomal protein L4p (L1e).
  
 0.999
APC90961.1
SSU ribosomal protein S19p (S15e).
  
 0.999
APC90963.1
SSU ribosomal protein S3p (S3e).
 
 0.999
APC90964.1
LSU ribosomal protein L16p (L10e).
  
 0.999
APC90966.1
SSU ribosomal protein S17p (S11e).
  
 0.999
APC90967.1
LSU ribosomal protein L14p (L23e).
  
 0.999
APC90968.1
LSU ribosomal protein L24p (L26e).
  
 
 0.999
Your Current Organism:
Francisella sp. MA067296
NCBI taxonomy Id: 475375
Other names: F. sp. MA067296
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