STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC91803.1Short-chain dehydrogenase/reductase SDR. (287 aa)    
Predicted Functional Partners:
APC91804.1
Cation transport regulator chaB.
       0.752
APC91000.1
Long-chain-fatty-acid--CoA ligase.
  
 0.714
APC91244.1
Long-chain-fatty-acid--CoA ligase.
 
 0.714
APC91615.1
Two-component sensor histidine kinase.
  
 
 0.598
APC91618.1
Hypothetical protein.
  
  0.597
APC92355.1
NADH-ubiquinone oxidoreductase chain M.
   
  0.595
APC91937.1
Hypothetical protein.
  
  0.592
APC91079.1
Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase.
  
 0.574
APC90903.1
Hypothetical protein.
   
 0.543
APC91187.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII.
 
 
 0.538
Your Current Organism:
Francisella sp. MA067296
NCBI taxonomy Id: 475375
Other names: F. sp. MA067296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.