Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APC90867.1 | APC91615.1 | BBG19_0129 | BBG19_0879 | Cell division protein FtsZ. | Two-component sensor histidine kinase. | 0.669 |
APC90867.1 | APC91617.1 | BBG19_0129 | BBG19_0881 | Cell division protein FtsZ. | Two-component sensor histidine kinase. | 0.667 |
APC90867.1 | APC92430.1 | BBG19_0129 | BBG19_1706 | Cell division protein FtsZ. | Hypothetical protein. | 0.512 |
APC91000.1 | APC91079.1 | BBG19_0262 | BBG19_0341 | Long-chain-fatty-acid--CoA ligase. | Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. | 0.782 |
APC91000.1 | APC91244.1 | BBG19_0262 | BBG19_0508 | Long-chain-fatty-acid--CoA ligase. | Long-chain-fatty-acid--CoA ligase. | 0.999 |
APC91000.1 | APC91615.1 | BBG19_0262 | BBG19_0879 | Long-chain-fatty-acid--CoA ligase. | Two-component sensor histidine kinase. | 0.804 |
APC91000.1 | APC91617.1 | BBG19_0262 | BBG19_0881 | Long-chain-fatty-acid--CoA ligase. | Two-component sensor histidine kinase. | 0.872 |
APC91000.1 | APC92016.1 | BBG19_0262 | BBG19_1284 | Long-chain-fatty-acid--CoA ligase. | Pullulanase. | 0.657 |
APC91000.1 | APC92430.1 | BBG19_0262 | BBG19_1706 | Long-chain-fatty-acid--CoA ligase. | Hypothetical protein. | 0.446 |
APC91079.1 | APC91000.1 | BBG19_0341 | BBG19_0262 | Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. | Long-chain-fatty-acid--CoA ligase. | 0.782 |
APC91079.1 | APC91244.1 | BBG19_0341 | BBG19_0508 | Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. | Long-chain-fatty-acid--CoA ligase. | 0.782 |
APC91079.1 | APC91615.1 | BBG19_0341 | BBG19_0879 | Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. | Two-component sensor histidine kinase. | 0.999 |
APC91079.1 | APC91617.1 | BBG19_0341 | BBG19_0881 | Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. | Two-component sensor histidine kinase. | 0.999 |
APC91079.1 | APC92016.1 | BBG19_0341 | BBG19_1284 | Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. | Pullulanase. | 0.649 |
APC91079.1 | APC92430.1 | BBG19_0341 | BBG19_1706 | Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. | Hypothetical protein. | 0.553 |
APC91244.1 | APC91000.1 | BBG19_0508 | BBG19_0262 | Long-chain-fatty-acid--CoA ligase. | Long-chain-fatty-acid--CoA ligase. | 0.999 |
APC91244.1 | APC91079.1 | BBG19_0508 | BBG19_0341 | Long-chain-fatty-acid--CoA ligase. | Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. | 0.782 |
APC91244.1 | APC91615.1 | BBG19_0508 | BBG19_0879 | Long-chain-fatty-acid--CoA ligase. | Two-component sensor histidine kinase. | 0.804 |
APC91244.1 | APC91617.1 | BBG19_0508 | BBG19_0881 | Long-chain-fatty-acid--CoA ligase. | Two-component sensor histidine kinase. | 0.871 |
APC91244.1 | APC92016.1 | BBG19_0508 | BBG19_1284 | Long-chain-fatty-acid--CoA ligase. | Pullulanase. | 0.657 |
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