STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
orf7Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (90 aa)    
Predicted Functional Partners:
orf10
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.825
OOR90543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
traL
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.605
orf12
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.597
orf6
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      
 0.566
orf17
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.434
orf20
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.434
orf5
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      
 0.432
Your Current Organism:
Moraxella bovis
NCBI taxonomy Id: 476
Other names: ATCC 10900, CCUG 2133, CIP 70.40, DSM 6328, Haemophilus bovis, JCM 20472, LMG 986, LMG:986, M. bovis, Moraxella duplex des bovids, NCTC 11013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.