Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOR89505.1Subtype I-F CRISPR-associated endonuclease Cas1; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)    
Predicted Functional Partners:
OOR89506.1
Type I-F CRISPR-associated helicase Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.970
cas6f
Type I-F CRISPR-associated endoribonuclease Cas6/Csy4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.929
csy1
Type I-F CRISPR-associated protein Csy1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.904
csy2
Type I-F CRISPR-associated protein Csy2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.904
csy3
Type I-F CRISPR-associated protein Csy3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.897
ihfA
Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
    
   0.821
cas2
CRISPR-associated endonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
  
 
 0.801
OOR88833.1
Integration host factor subunit beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
    
   0.682
cas4
Type V CRISPR-associated protein Cas4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.676
OOR90001.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.523
Your Current Organism:
Moraxella bovis
NCBI taxonomy Id: 476
Other names: ATCC 10900, CCUG 2133, CIP 70.40, DSM 6328, Haemophilus bovis, JCM 20472, LMG 986, LMG:986, M. bovis, Moraxella duplex des bovids, NCTC 11013
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