STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOR89306.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (634 aa)    
Predicted Functional Partners:
OOR89091.1
Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
hemJ
TIGR00701 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
B0182_10300
Formyl transferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.574
OOR92156.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.566
ccmI
C-type cytochrome biogenesis protein CcmI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
OOR89298.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.520
OOR87572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.476
OOR87422.1
ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
  
   
 0.463
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
      
 0.406
mreD
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
Your Current Organism:
Moraxella bovis
NCBI taxonomy Id: 476
Other names: ATCC 10900, CCUG 2133, CIP 70.40, DSM 6328, Haemophilus bovis, JCM 20472, LMG 986, LMG:986, M. bovis, Moraxella duplex des bovids, NCTC 11013
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