Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
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[Homology]
Score
OOR88810.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)    
Predicted Functional Partners:
OOR88840.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.818
OOR88809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
OOR88811.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.710
OOR88806.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.518
OOR88812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.478
OOR88808.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.471
OOR88807.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.466
nagZ
beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
 
   
 0.412
Your Current Organism:
Moraxella bovis
NCBI taxonomy Id: 476
Other names: ATCC 10900, CCUG 2133, CIP 70.40, DSM 6328, Haemophilus bovis, JCM 20472, LMG 986, LMG:986, M. bovis, Moraxella duplex des bovids, NCTC 11013
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