STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JN10_0359Unannotated protein. (67 aa)    
Predicted Functional Partners:
JN10_0360
Unannotated protein.
       0.798
JN10_2374
Unannotated protein.
  
     0.767
JN10_0224
Unannotated protein.
  
     0.737
xseA
Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.695
JN10_1941
Unannotated protein; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
  
     0.599
JN10_2498
Unannotated protein.
  
     0.584
purD
Unannotated protein; Belongs to the GARS family.
       0.547
JN10_0072
Unannotated protein.
  
     0.547
JN10_1356
Unannotated protein.
  
     0.542
JN10_0611
Unannotated protein; Belongs to the Nudix hydrolase family.
  
     0.540
Your Current Organism:
Altererythrobacter ishigakiensis
NCBI taxonomy Id: 476157
Other names: A. ishigakiensis, ATCC BAA-2084, Altererythrobacter ishigakiensis Matsumoto et al. 2011, NBRC 107699, strain JPCCMB0017, strain NITE-AP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.