STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JN10_0159Unannotated protein. (178 aa)    
Predicted Functional Partners:
JN10_0165
Unannotated protein.
  
     0.773
JN10_0158
Unannotated protein.
       0.773
JN10_0167
Unannotated protein.
  
     0.696
JN10_0180
Unannotated protein.
 
     0.652
JN10_0157
Unannotated protein.
 
     0.646
JN10_0181
Unannotated protein.
  
     0.627
JN10_1585
Unannotated protein.
    
 0.619
JN10_0170
Unannotated protein.
 
    0.586
JN10_0670
Unannotated protein.
  
 
  0.556
JN10_0156
Unannotated protein.
  
 
  0.556
Your Current Organism:
Altererythrobacter ishigakiensis
NCBI taxonomy Id: 476157
Other names: A. ishigakiensis, ATCC BAA-2084, Altererythrobacter ishigakiensis Matsumoto et al. 2011, NBRC 107699, strain JPCCMB0017, strain NITE-AP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.