Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JN10_0049 | JN10_1339 | GCA_001663155_00691 | GCA_001663155_02014 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.813 |
JN10_0049 | JN10_2211 | GCA_001663155_00691 | GCA_001663155_00886 | Unannotated protein. | Unannotated protein. | 0.572 |
JN10_0049 | JN10_2214 | GCA_001663155_00691 | GCA_001663155_00889 | Unannotated protein. | Unannotated protein. | 0.528 |
JN10_0049 | accD | GCA_001663155_00691 | GCA_001663155_01401 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.749 |
JN10_1339 | JN10_0049 | GCA_001663155_02014 | GCA_001663155_00691 | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Unannotated protein. | 0.813 |
JN10_1339 | JN10_1898 | GCA_001663155_02014 | GCA_001663155_01458 | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Unannotated protein. | 0.725 |
JN10_1339 | JN10_2211 | GCA_001663155_02014 | GCA_001663155_00886 | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Unannotated protein. | 0.529 |
JN10_1339 | accD | GCA_001663155_02014 | GCA_001663155_01401 | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.991 |
JN10_1898 | JN10_1339 | GCA_001663155_01458 | GCA_001663155_02014 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.725 |
JN10_1898 | JN10_2211 | GCA_001663155_01458 | GCA_001663155_00886 | Unannotated protein. | Unannotated protein. | 0.514 |
JN10_1898 | accD | GCA_001663155_01458 | GCA_001663155_01401 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.919 |
JN10_2209 | JN10_2210 | GCA_001663155_00884 | GCA_001663155_00885 | Unannotated protein. | Unannotated protein. | 0.862 |
JN10_2209 | JN10_2211 | GCA_001663155_00884 | GCA_001663155_00886 | Unannotated protein. | Unannotated protein. | 0.721 |
JN10_2209 | JN10_2212 | GCA_001663155_00884 | GCA_001663155_00887 | Unannotated protein. | Unannotated protein. | 0.830 |
JN10_2209 | JN10_2213 | GCA_001663155_00884 | GCA_001663155_00888 | Unannotated protein. | Unannotated protein. | 0.798 |
JN10_2209 | JN10_2214 | GCA_001663155_00884 | GCA_001663155_00889 | Unannotated protein. | Unannotated protein. | 0.438 |
JN10_2209 | JN10_2215 | GCA_001663155_00884 | GCA_001663155_00890 | Unannotated protein. | Unannotated protein. | 0.417 |
JN10_2210 | JN10_2209 | GCA_001663155_00885 | GCA_001663155_00884 | Unannotated protein. | Unannotated protein. | 0.862 |
JN10_2210 | JN10_2211 | GCA_001663155_00885 | GCA_001663155_00886 | Unannotated protein. | Unannotated protein. | 0.720 |
JN10_2210 | JN10_2212 | GCA_001663155_00885 | GCA_001663155_00887 | Unannotated protein. | Unannotated protein. | 0.808 |
page 1 of 3