Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JN10_0398 | JN10_0484 | GCA_001663155_00345 | GCA_001663155_00260 | Unannotated protein. | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.638 |
JN10_0398 | JN10_1131 | GCA_001663155_00345 | GCA_001663155_02222 | Unannotated protein. | Unannotated protein. | 0.656 |
JN10_0398 | JN10_1519 | GCA_001663155_00345 | GCA_001663155_01836 | Unannotated protein. | Unannotated protein. | 0.607 |
JN10_0398 | JN10_1930 | GCA_001663155_00345 | GCA_001663155_01426 | Unannotated protein. | Unannotated protein. | 0.577 |
JN10_0398 | lptD | GCA_001663155_00345 | GCA_001663155_01163 | Unannotated protein. | Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.581 |
JN10_0484 | JN10_0398 | GCA_001663155_00260 | GCA_001663155_00345 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.638 |
JN10_0484 | JN10_1131 | GCA_001663155_00260 | GCA_001663155_02222 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.504 |
JN10_0484 | JN10_1519 | GCA_001663155_00260 | GCA_001663155_01836 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.768 |
JN10_0484 | JN10_1930 | GCA_001663155_00260 | GCA_001663155_01426 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.631 |
JN10_0484 | JN10_2389 | GCA_001663155_00260 | GCA_001663155_01065 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.813 |
JN10_0484 | lptD | GCA_001663155_00260 | GCA_001663155_01163 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.803 |
JN10_1131 | JN10_0398 | GCA_001663155_02222 | GCA_001663155_00345 | Unannotated protein. | Unannotated protein. | 0.656 |
JN10_1131 | JN10_0484 | GCA_001663155_02222 | GCA_001663155_00260 | Unannotated protein. | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.504 |
JN10_1131 | JN10_1519 | GCA_001663155_02222 | GCA_001663155_01836 | Unannotated protein. | Unannotated protein. | 0.498 |
JN10_1131 | JN10_1746 | GCA_001663155_02222 | GCA_001663155_01610 | Unannotated protein. | Unannotated protein. | 0.706 |
JN10_1131 | JN10_1930 | GCA_001663155_02222 | GCA_001663155_01426 | Unannotated protein. | Unannotated protein. | 0.505 |
JN10_1131 | lptD | GCA_001663155_02222 | GCA_001663155_01163 | Unannotated protein. | Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.601 |
JN10_1519 | JN10_0398 | GCA_001663155_01836 | GCA_001663155_00345 | Unannotated protein. | Unannotated protein. | 0.607 |
JN10_1519 | JN10_0484 | GCA_001663155_01836 | GCA_001663155_00260 | Unannotated protein. | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.768 |
JN10_1519 | JN10_1131 | GCA_001663155_01836 | GCA_001663155_02222 | Unannotated protein. | Unannotated protein. | 0.498 |
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