STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JN10_1732Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (213 aa)    
Predicted Functional Partners:
JN10_0275
Unannotated protein.
    
 0.897
JN10_2393
Unannotated protein.
 
 
 0.843
JN10_1730
Unannotated protein.
     
 0.698
JN10_1731
Unannotated protein.
       0.697
JN10_0575
Unannotated protein.
  
    0.682
JN10_1733
Unannotated protein.
       0.663
JN10_2344
Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 
0.576
lipA
Unannotated protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.520
JN10_1728
Unannotated protein.
       0.520
apt
Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.483
Your Current Organism:
Altererythrobacter ishigakiensis
NCBI taxonomy Id: 476157
Other names: A. ishigakiensis, ATCC BAA-2084, Altererythrobacter ishigakiensis Matsumoto et al. 2011, NBRC 107699, strain JPCCMB0017, strain NITE-AP48
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