Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JN10_1590 | JN10_1592 | GCA_001663155_01766 | GCA_001663155_01764 | Unannotated protein. | Unannotated protein. | 0.844 |
JN10_1590 | JN10_1593 | GCA_001663155_01766 | GCA_001663155_01763 | Unannotated protein. | Unannotated protein. | 0.842 |
JN10_1590 | JN10_1595 | GCA_001663155_01766 | GCA_001663155_01761 | Unannotated protein. | Unannotated protein. | 0.448 |
JN10_1590 | ilvC | GCA_001663155_01766 | GCA_001663155_01765 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.734 |
JN10_1590 | miaA | GCA_001663155_01766 | GCA_001663155_01762 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.573 |
JN10_1592 | JN10_1590 | GCA_001663155_01764 | GCA_001663155_01766 | Unannotated protein. | Unannotated protein. | 0.844 |
JN10_1592 | JN10_1593 | GCA_001663155_01764 | GCA_001663155_01763 | Unannotated protein. | Unannotated protein. | 0.999 |
JN10_1592 | JN10_1595 | GCA_001663155_01764 | GCA_001663155_01761 | Unannotated protein. | Unannotated protein. | 0.755 |
JN10_1592 | ilvC | GCA_001663155_01764 | GCA_001663155_01765 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.998 |
JN10_1592 | miaA | GCA_001663155_01764 | GCA_001663155_01762 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.728 |
JN10_1593 | JN10_1590 | GCA_001663155_01763 | GCA_001663155_01766 | Unannotated protein. | Unannotated protein. | 0.842 |
JN10_1593 | JN10_1592 | GCA_001663155_01763 | GCA_001663155_01764 | Unannotated protein. | Unannotated protein. | 0.999 |
JN10_1593 | JN10_1595 | GCA_001663155_01763 | GCA_001663155_01761 | Unannotated protein. | Unannotated protein. | 0.535 |
JN10_1593 | ilvC | GCA_001663155_01763 | GCA_001663155_01765 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.994 |
JN10_1593 | miaA | GCA_001663155_01763 | GCA_001663155_01762 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.694 |
JN10_1595 | JN10_1590 | GCA_001663155_01761 | GCA_001663155_01766 | Unannotated protein. | Unannotated protein. | 0.448 |
JN10_1595 | JN10_1592 | GCA_001663155_01761 | GCA_001663155_01764 | Unannotated protein. | Unannotated protein. | 0.755 |
JN10_1595 | JN10_1593 | GCA_001663155_01761 | GCA_001663155_01763 | Unannotated protein. | Unannotated protein. | 0.535 |
JN10_1595 | ilvC | GCA_001663155_01761 | GCA_001663155_01765 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.530 |
JN10_1595 | miaA | GCA_001663155_01761 | GCA_001663155_01762 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.665 |
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