STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheBUnannotated protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (367 aa)    
Predicted Functional Partners:
JN10_0946
Unannotated protein.
 
 0.999
JN10_0942
Unannotated protein.
 
 0.998
JN10_0945
Unannotated protein.
 
 
 0.993
JN10_0940
Unannotated protein.
 
 0.967
JN10_0944
Unannotated protein.
 
 
 0.947
JN10_1672
Unannotated protein.
 
 0.943
JN10_1976
Unannotated protein.
 
 0.937
JN10_2065
Unannotated protein.
 
 0.928
JN10_2066
Unannotated protein.
 
 0.927
JN10_0941
Unannotated protein.
 
 0.886
Your Current Organism:
Altererythrobacter ishigakiensis
NCBI taxonomy Id: 476157
Other names: A. ishigakiensis, ATCC BAA-2084, Altererythrobacter ishigakiensis Matsumoto et al. 2011, NBRC 107699, strain JPCCMB0017, strain NITE-AP48
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