STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JN10_0934Unannotated protein. (173 aa)    
Predicted Functional Partners:
JN10_0933
Unannotated protein.
 
     0.866
JN10_0932
Unannotated protein.
       0.664
JN10_0931
Unannotated protein.
       0.664
JN10_1311
Unannotated protein.
  
     0.592
JN10_1519
Unannotated protein.
  
     0.497
JN10_0930
Unannotated protein.
       0.488
JN10_0454
Unannotated protein.
  
     0.482
JN10_0318
Unannotated protein.
  
     0.453
JN10_0341
Unannotated protein.
  
     0.416
Your Current Organism:
Altererythrobacter ishigakiensis
NCBI taxonomy Id: 476157
Other names: A. ishigakiensis, ATCC BAA-2084, Altererythrobacter ishigakiensis Matsumoto et al. 2011, NBRC 107699, strain JPCCMB0017, strain NITE-AP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.