STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JN10_0918Unannotated protein. (784 aa)    
Predicted Functional Partners:
JN10_0917
Unannotated protein.
 
     0.794
JN10_1056
Unannotated protein.
  
 
  0.741
JN10_2259
Unannotated protein.
  
     0.715
JN10_0564
Unannotated protein.
  
   
 0.684
JN10_1438
Unannotated protein.
  
     0.681
JN10_0912
Unannotated protein.
  
     0.661
JN10_1435
Unannotated protein.
  
     0.627
JN10_0029
Unannotated protein.
  
     0.621
JN10_2245
Unannotated protein.
  
     0.605
JN10_0437
Unannotated protein.
  
     0.594
Your Current Organism:
Altererythrobacter ishigakiensis
NCBI taxonomy Id: 476157
Other names: A. ishigakiensis, ATCC BAA-2084, Altererythrobacter ishigakiensis Matsumoto et al. 2011, NBRC 107699, strain JPCCMB0017, strain NITE-AP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.