STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JN10_0915Unannotated protein. (167 aa)    
Predicted Functional Partners:
JN10_1209
Unannotated protein.
 
 
 0.996
JN10_1287
Unannotated protein.
  
 
 0.987
folE
Unannotated protein.
 
  
 0.978
JN10_0488
Unannotated protein.
 
 
 0.883
ribB
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 0.817
JN10_1955
Unannotated protein; Belongs to the folylpolyglutamate synthase family.
 
 
 0.813
JN10_1201
Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
    0.714
JN10_2378
Unannotated protein.
 
  
 0.624
JN10_2152
Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
  0.552
JN10_0852
Unannotated protein; Belongs to the pyruvate kinase family.
    
  0.547
Your Current Organism:
Altererythrobacter ishigakiensis
NCBI taxonomy Id: 476157
Other names: A. ishigakiensis, ATCC BAA-2084, Altererythrobacter ishigakiensis Matsumoto et al. 2011, NBRC 107699, strain JPCCMB0017, strain NITE-AP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.