STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjMPredicted inner membrane protein regulated by LexA. (191 aa)    
Predicted Functional Partners:
ftsN
Essential cell division protein.
  
     0.725
tsgA
Hypothetical protein.
  
     0.715
nlpB
Lipoprotein.
  
     0.695
yqjE
Conserved inner membrane protein.
  
     0.626
pgpB
Phosphatidylglycerophosphatase B.
 
    0.561
dnaC
DNA biosynthesis protein.
  
     0.551
ftsL
Membrane bound cell division protein at septum containing leucine zipper motif.
  
     0.544
yqjD
Hypothetical protein.
  
     0.455
fxsA
Inner membrane protein.
  
     0.443
elaB
Hypothetical protein.
  
     0.440
Your Current Organism:
Ishikawaella capsulata
NCBI taxonomy Id: 476281
Other names: C. Ishikawaella capsulata Mpkobe, Candidatus Ishikawaella capsulata Mpkobe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.