STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rsxBMember of SoxR-reducing complex; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (179 aa)    
Predicted Functional Partners:
rsxC
Member of SoxR-reducing complex; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
 0.996
rsxA
Integral membrane protein of SoxR-reducing complex; Belongs to the NqrDE/RnfAE family.
 
 
 0.995
rsxD
Member of SoxR-reducing complex; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
 
 0.990
rsxE
Integral membrane protein of SoxR-reducing complex; Belongs to the NqrDE/RnfAE family.
 
 
 0.987
yfjF
Hypothetical protein; Belongs to the UPF0125 (RnfH) family.
 
   
 0.779
nth
DNA glycosylase and apyrimidinic (AP) lyase.
  
  
 0.672
ICMP_433
Hypothetical protein.
       0.631
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.547
sspB
ClpXP protease specificity-enhancing factor.
  
     0.409
Your Current Organism:
Ishikawaella capsulata
NCBI taxonomy Id: 476281
Other names: C. Ishikawaella capsulata Mpkobe, Candidatus Ishikawaella capsulata Mpkobe
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