STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yccVDNA-binding protein. (115 aa)    
Predicted Functional Partners:
ftsL
Membrane bound cell division protein at septum containing leucine zipper motif.
  
     0.758
nlpB
Lipoprotein.
  
     0.738
tsgA
Hypothetical protein.
  
     0.720
ftsN
Essential cell division protein.
  
     0.700
yqjE
Conserved inner membrane protein.
  
     0.692
yjeP
Predicted mechanosensitive channel.
  
     0.645
pgpB
Phosphatidylglycerophosphatase B.
  
     0.616
fxsA
Inner membrane protein.
  
    0.499
yqjD
Hypothetical protein.
  
     0.491
hemD
uroporphyrinogen-III synthetase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.486
Your Current Organism:
Ishikawaella capsulata
NCBI taxonomy Id: 476281
Other names: C. Ishikawaella capsulata Mpkobe, Candidatus Ishikawaella capsulata Mpkobe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.