STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjcEPredicted cation/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (553 aa)    
Predicted Functional Partners:
yqjD
Hypothetical protein.
  
     0.550
yqjE
Conserved inner membrane protein.
  
     0.545
ftsL
Membrane bound cell division protein at septum containing leucine zipper motif.
  
     0.520
nlpB
Lipoprotein.
  
     0.500
pgpB
Phosphatidylglycerophosphatase B.
 
 
   0.485
apaH
Diadenosinetetraphosphatase.
    
   0.449
tsgA
Hypothetical protein.
  
     0.423
yfgM
Hypothetical protein.
  
     0.420
yba2
Hypothetical protein.
  
     0.419
ybhL
Predicted inner membrane protein; Belongs to the BI1 family.
  
     0.410
Your Current Organism:
Ishikawaella capsulata
NCBI taxonomy Id: 476281
Other names: C. Ishikawaella capsulata Mpkobe, Candidatus Ishikawaella capsulata Mpkobe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.