Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU67625.1 | rus | DEAC_c00190 | DEAC_c00200 | Hypothetical protein. | Rusticyanin precursor. | 0.550 |
baeS_1 | rus | DEAC_c00220 | DEAC_c00200 | Signal transduction histidine-protein kinase BaeS. | Rusticyanin precursor. | 0.433 |
baeS_1 | sphR | DEAC_c00220 | DEAC_c00210 | Signal transduction histidine-protein kinase BaeS. | Alkaline phosphatase synthesis transcriptional regulatory protein SphR. | 0.973 |
copA | rus | DEAC_c00320 | DEAC_c00200 | Copper-exporting P-type ATPase A. | Rusticyanin precursor. | 0.446 |
rus | KLU67625.1 | DEAC_c00200 | DEAC_c00190 | Rusticyanin precursor. | Hypothetical protein. | 0.550 |
rus | baeS_1 | DEAC_c00200 | DEAC_c00220 | Rusticyanin precursor. | Signal transduction histidine-protein kinase BaeS. | 0.433 |
rus | copA | DEAC_c00200 | DEAC_c00320 | Rusticyanin precursor. | Copper-exporting P-type ATPase A. | 0.446 |
rus | sphR | DEAC_c00200 | DEAC_c00210 | Rusticyanin precursor. | Alkaline phosphatase synthesis transcriptional regulatory protein SphR. | 0.430 |
sphR | baeS_1 | DEAC_c00210 | DEAC_c00220 | Alkaline phosphatase synthesis transcriptional regulatory protein SphR. | Signal transduction histidine-protein kinase BaeS. | 0.973 |
sphR | rus | DEAC_c00210 | DEAC_c00200 | Alkaline phosphatase synthesis transcriptional regulatory protein SphR. | Rusticyanin precursor. | 0.430 |