STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU67954.1PRC-barrel domain protein. (262 aa)    
Predicted Functional Partners:
vanW_2
Vancomycin B-type resistance protein VanW.
       0.758
KLU66148.1
Rod shape-determining protein MreD.
  
     0.742
KLU67955.1
Hypothetical protein.
  
    0.740
KLU66448.1
PRC-barrel domain protein.
  
     0.734
spoIIM
Stage II sporulation protein M.
  
     0.681
KLU67013.1
Maltose ABC transporter periplasmic protein.
 
     0.660
KLU67320.1
Hypothetical protein.
  
     0.657
KLU64972.1
HlyD family secretion protein.
  
     0.647
KLU67993.1
Hypothetical protein.
  
     0.639
KLU65018.1
Hypothetical protein.
  
     0.635
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.