STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrp1_2Hypoxic response protein 1. (143 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 0.961
KLU64849.1
Z1 domain protein.
   
 0.946
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.937
stp_3
Serine/threonine phosphatase stp.
     
 0.827
stp_5
Serine/threonine phosphatase stp.
     
 0.827
ppaC
Manganese-dependent inorganic pyrophosphatase.
    
 0.738
KLU67959.1
Hypothetical protein.
       0.718
pdhD
Dihydrolipoyl dehydrogenase.
   
   0.690
guaB_2
Inosine-5'-monophosphate dehydrogenase.
  
 
 0.683
purL
Phosphoribosylformylglycinamidine synthase.
  
  
 0.646
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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