STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppD_1Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (327 aa)    
Predicted Functional Partners:
gsiD
Glutathione transport system permease protein GsiD.
 
 0.999
oppC
Oligopeptide transport system permease protein OppC.
 
 0.998
dppB
Dipeptide transport system permease protein DppB.
 0.996
oppB
Oligopeptide transport system permease protein OppB.
 0.990
oppF_1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 
0.988
hbpA
Heme-binding protein A precursor.
 
 0.973
oppA_2
Oligopeptide-binding protein OppA precursor.
 
 0.927
oppA_1
Oligopeptide-binding protein OppA precursor.
 
 0.926
oppF_2
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 
 
0.908
pstB3
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.