STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepM_1Murein DD-endopeptidase MepM. (381 aa)    
Predicted Functional Partners:
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.893
fliN
Flagellar motor switch protein FliN.
   
   0.860
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.850
KLU67021.1
Putative CtpA-like serine protease; Belongs to the peptidase S41A family.
 
 
 
 0.712
iap_1
Putative endopeptidase p60 precursor.
 
 
0.632
lytH
L-Ala--D-Glu endopeptidase precursor.
  
     0.609
ponA_2
Penicillin-binding protein 1A/1B.
  
     0.594
ponA_1
Penicillin-binding protein 1A/1B.
  
     0.592
cphA_1
Cyanophycin synthetase; Belongs to the MurCDEF family.
    
 0.540
cphA_2
Cyanophycin synthetase; Belongs to the MurCDEF family.
    
 0.540
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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