Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU64329.1 | cphA_1 | DEAC_c37630 | DEAC_c11210 | Hypothetical protein. | Cyanophycin synthetase; Belongs to the MurCDEF family. | 0.916 |
KLU64329.1 | ftsQ | DEAC_c37630 | DEAC_c29500 | Hypothetical protein. | Cell division protein FtsQ; Essential cell division protein. | 0.939 |
KLU64329.1 | murC | DEAC_c37630 | DEAC_c07550 | Hypothetical protein. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.527 |
KLU64329.1 | murD_1 | DEAC_c37630 | DEAC_c29560 | Hypothetical protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.631 |
KLU64329.1 | murF | DEAC_c37630 | DEAC_c29580 | Hypothetical protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.469 |
cobQ_2 | cphA_1 | DEAC_c30670 | DEAC_c11210 | Cobyric acid synthase. | Cyanophycin synthetase; Belongs to the MurCDEF family. | 0.946 |
cphA_1 | KLU64329.1 | DEAC_c11210 | DEAC_c37630 | Cyanophycin synthetase; Belongs to the MurCDEF family. | Hypothetical protein. | 0.916 |
cphA_1 | cobQ_2 | DEAC_c11210 | DEAC_c30670 | Cyanophycin synthetase; Belongs to the MurCDEF family. | Cobyric acid synthase. | 0.946 |
cphA_1 | cphB | DEAC_c11210 | DEAC_c11200 | Cyanophycin synthetase; Belongs to the MurCDEF family. | Cyanophycinase; Belongs to the peptidase S51 family. | 0.978 |
cphA_1 | ftsA_1 | DEAC_c11210 | DEAC_c02900 | Cyanophycin synthetase; Belongs to the MurCDEF family. | Cell division protein FtsA. | 0.961 |
cphA_1 | ftsQ | DEAC_c11210 | DEAC_c29500 | Cyanophycin synthetase; Belongs to the MurCDEF family. | Cell division protein FtsQ; Essential cell division protein. | 0.949 |
cphA_1 | mraY | DEAC_c11210 | DEAC_c29570 | Cyanophycin synthetase; Belongs to the MurCDEF family. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.932 |
cphA_1 | murC | DEAC_c11210 | DEAC_c07550 | Cyanophycin synthetase; Belongs to the MurCDEF family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.962 |
cphA_1 | murD_1 | DEAC_c11210 | DEAC_c29560 | Cyanophycin synthetase; Belongs to the MurCDEF family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.981 |
cphA_1 | murF | DEAC_c11210 | DEAC_c29580 | Cyanophycin synthetase; Belongs to the MurCDEF family. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.976 |
cphA_1 | tagO | DEAC_c11210 | DEAC_c13140 | Cyanophycin synthetase; Belongs to the MurCDEF family. | Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | 0.932 |
cphB | cphA_1 | DEAC_c11200 | DEAC_c11210 | Cyanophycinase; Belongs to the peptidase S51 family. | Cyanophycin synthetase; Belongs to the MurCDEF family. | 0.978 |
ftsA_1 | cphA_1 | DEAC_c02900 | DEAC_c11210 | Cell division protein FtsA. | Cyanophycin synthetase; Belongs to the MurCDEF family. | 0.961 |
ftsA_1 | ftsQ | DEAC_c02900 | DEAC_c29500 | Cell division protein FtsA. | Cell division protein FtsQ; Essential cell division protein. | 0.968 |
ftsA_1 | murC | DEAC_c02900 | DEAC_c07550 | Cell division protein FtsA. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.595 |
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