STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yabPSpore protein YabP. (92 aa)    
Predicted Functional Partners:
KLU67194.1
Spore cortex protein YabQ (spore_YabQ).
  
  
 0.968
spoVT
Stage V sporulation protein T.
 
     0.857
spoIIE
Stage II sporulation protein E.
 
     0.845
spoIVB
SpoIVB peptidase precursor.
  
   
 0.816
spoIIID
Stage III sporulation protein D.
  
   
 0.812
KLU66271.1
Hypothetical protein.
  
  
 0.798
KLU66269.1
Stage III sporulation protein AC/AD protein family protein.
  
  
 0.795
KLU65988.1
Putative stage IV sporulation protein YqfD.
 
   
 0.794
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.791
ylbJ
Sporulation integral membrane protein YlbJ.
  
   
 0.790
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.