STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU66515.1Hypothetical protein. (415 aa)    
Predicted Functional Partners:
flr
Flavoredoxin.
  
    0.706
lytC_4
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
     0.630
lytC_25
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
     0.621
lytC_2
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
     0.601
KLU64168.1
AAA domain (dynein-related subfamily).
 
    0.514
lytC_18
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
     0.504
lytC_23
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
     0.497
lytC_22
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
     0.491
KLU67795.1
Acetyltransferase (GNAT) family protein.
  
     0.477
KLU64464.1
Putative PhzA/B-like protein.
  
     0.455
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.