STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytB_2Amidase enhancer precursor. (710 aa)    
Predicted Functional Partners:
KLU67013.1
Maltose ABC transporter periplasmic protein.
 
     0.752
ebgA
Evolved beta-galactosidase subunit alpha.
  
    0.752
KLU65138.1
NYN domain protein.
  
     0.724
KLU66178.1
Hypothetical protein.
  
     0.682
ndhI_2
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
  
     0.679
sqhC
Sporulenol synthase.
  
     0.665
KLU65018.1
Hypothetical protein.
  
     0.656
KLU67764.1
Putative hydrolase.
  
     0.646
KLU66676.1
Hypothetical protein.
 
     0.638
KLU67902.1
Tetratricopeptide repeat protein.
  
     0.632
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.