Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU66647.1 | tagO | DEAC_c13130 | DEAC_c13140 | S-methyl-5'-thioinosine phosphorylase. | Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | 0.776 |
KLU66647.1 | trmL | DEAC_c13130 | DEAC_c13120 | S-methyl-5'-thioinosine phosphorylase. | tRNA (cytidine(34)-2'-O)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.760 |
KLU66647.1 | ulaG | DEAC_c13130 | DEAC_c13160 | S-methyl-5'-thioinosine phosphorylase. | L-ascorbate-6-phosphate lactonase UlaG; Belongs to the UPF0173 family. | 0.490 |
KLU66647.1 | ydhD_3 | DEAC_c13130 | DEAC_c13150 | S-methyl-5'-thioinosine phosphorylase. | Putative sporulation-specific glycosylase YdhD. | 0.538 |
KLU66651.1 | KLU66652.1 | DEAC_c13170 | DEAC_c13180 | Hypothetical protein. | Small, acid-soluble spore protein, alpha/beta type. | 0.773 |
KLU66651.1 | KLU66653.1 | DEAC_c13170 | DEAC_c13190 | Hypothetical protein. | Cobalt-dependent inorganic pyrophosphatase. | 0.574 |
KLU66651.1 | ulaG | DEAC_c13170 | DEAC_c13160 | Hypothetical protein. | L-ascorbate-6-phosphate lactonase UlaG; Belongs to the UPF0173 family. | 0.493 |
KLU66651.1 | ydhD_3 | DEAC_c13170 | DEAC_c13150 | Hypothetical protein. | Putative sporulation-specific glycosylase YdhD. | 0.450 |
KLU66652.1 | KLU66651.1 | DEAC_c13180 | DEAC_c13170 | Small, acid-soluble spore protein, alpha/beta type. | Hypothetical protein. | 0.773 |
KLU66652.1 | KLU66653.1 | DEAC_c13180 | DEAC_c13190 | Small, acid-soluble spore protein, alpha/beta type. | Cobalt-dependent inorganic pyrophosphatase. | 0.577 |
KLU66652.1 | ulaG | DEAC_c13180 | DEAC_c13160 | Small, acid-soluble spore protein, alpha/beta type. | L-ascorbate-6-phosphate lactonase UlaG; Belongs to the UPF0173 family. | 0.493 |
KLU66652.1 | ydhD_3 | DEAC_c13180 | DEAC_c13150 | Small, acid-soluble spore protein, alpha/beta type. | Putative sporulation-specific glycosylase YdhD. | 0.450 |
KLU66653.1 | KLU66651.1 | DEAC_c13190 | DEAC_c13170 | Cobalt-dependent inorganic pyrophosphatase. | Hypothetical protein. | 0.574 |
KLU66653.1 | KLU66652.1 | DEAC_c13190 | DEAC_c13180 | Cobalt-dependent inorganic pyrophosphatase. | Small, acid-soluble spore protein, alpha/beta type. | 0.577 |
KLU66653.1 | ulaG | DEAC_c13190 | DEAC_c13160 | Cobalt-dependent inorganic pyrophosphatase. | L-ascorbate-6-phosphate lactonase UlaG; Belongs to the UPF0173 family. | 0.425 |
mtlR | ulaG | DEAC_c25850 | DEAC_c13160 | Transcriptional regulator MtlR. | L-ascorbate-6-phosphate lactonase UlaG; Belongs to the UPF0173 family. | 0.718 |
mtlR | xylB | DEAC_c25850 | DEAC_c00480 | Transcriptional regulator MtlR. | Xylulose kinase. | 0.580 |
tagO | KLU66647.1 | DEAC_c13140 | DEAC_c13130 | Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | S-methyl-5'-thioinosine phosphorylase. | 0.776 |
tagO | trmL | DEAC_c13140 | DEAC_c13120 | Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | tRNA (cytidine(34)-2'-O)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.771 |
tagO | ulaG | DEAC_c13140 | DEAC_c13160 | Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | L-ascorbate-6-phosphate lactonase UlaG; Belongs to the UPF0173 family. | 0.507 |
page 1 of 3