STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ulaGL-ascorbate-6-phosphate lactonase UlaG; Belongs to the UPF0173 family. (233 aa)    
Predicted Functional Partners:
mtlR
Transcriptional regulator MtlR.
    
 0.718
ydhD_3
Putative sporulation-specific glycosylase YdhD.
       0.697
tagO
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
       0.507
KLU66651.1
Hypothetical protein.
       0.493
KLU66652.1
Small, acid-soluble spore protein, alpha/beta type.
       0.493
KLU66647.1
S-methyl-5'-thioinosine phosphorylase.
       0.490
trmL
tRNA (cytidine(34)-2'-O)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.486
xylB
Xylulose kinase.
    
  0.471
KLU66653.1
Cobalt-dependent inorganic pyrophosphatase.
     
 0.425
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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