STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
immR_1HTH-type transcriptional regulator ImmR. (127 aa)    
Predicted Functional Partners:
cinA_1
Putative competence-damage inducible protein; Belongs to the CinA family.
    
 0.566
KLU66715.1
Hypothetical protein.
       0.511
xerC_2
Tyrosine recombinase XerC; Belongs to the 'phage' integrase family.
 
     0.488
gluP_2
Rhomboid protease GluP.
     
 0.448
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.434
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
    
  0.434
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.434
KLU66348.1
Recombinase.
  
     0.416
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.